dMRI-Lab 1.0
demo_AMURA_developer.m File Reference

This demo illustrates the basic use of the AMURA module, aimed at the analysis of single-shell, HARDI like dMRI data sets. More...

Detailed Description

This demo illustrates the basic use of the AMURA module, aimed at the analysis of single-shell, HARDI like dMRI data sets.

Compute standard measures... And more

atti2artop dwifile.nii gifile.bvec
bifile.bval rtopfile.nii -mask maskfile.nii rtopfile.nii
-lambda 0.001 -tau 70.0e-3
atti2artpp dwifile.nii gifile.bvec
bifile.bval rtppfile.nii -mask maskfile.nii rtppfile.nii
-lambda 0.001 -tl 1.0e-7
atti2artap dwifile.nii gifile.bvec
bifile.bval rtppfile.nii -mask maskfile.nii rtapfile.nii
-lambda 0.001 -tl 1.0e-7 -clean 50
atti2apa dwifile.nii gifile.bvec
bifile.bval pafile.nii -mask maskfile.nii
-lambda 0.001 -L 8 -tl 1.0e-7 -epsilon 0.4
atti2ang dwifile.nii gifile.bvec
bifile.bval pafile.nii -mask maskfile.nii
-lambda 0.001 -L 8 -tl 1.0e-7
function atti2ang(in dwifile, in gifile, in bifile, in ngfile, in varargin)
function atti2apa(in dwifile, in gifile, in bifile, in pafile, in varargin)
function atti2artap(in dwifile, in gifile, in bifile, in rtapfile, in varargin)
function atti2artop(in dwifile, in gifile, in bifile, in rtopfile, in varargin)
function atti2artpp(in dwifile, in gifile, in bifile, in rtppfile, in varargin)

Plot the results